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Alignment Software
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ftp://ncbi.nlm.nih.gov/pub/macaw/ ftp://ncbi.nlm.nih.gov/pub/macaw/
Multiple sequence alignments, for both Windows (3.1, NT on Intel and Alpha chips) and Macintosh. Based on pattern-matching algorithms that attempt to identify blocks of local alignment similarity, rather than on the common Needleman and Wunsch global alignment algorithm.

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